Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015851185.1_cds_XP_016511411.1_24155
CDS Infomation

[gene=LOC107828581] [db_xref=GeneID:107828581] [protein=aspartic proteinase nepenthesin-1-like] [protein_id=XP_016511411.1] [location=11145..12533] [gbkey=CDS]
Sequence

ATGGCTTCTTCTTCTTCTTCCTATTTTCTCCTTTTTCTCTCTTTGTTTCCTCTCCTCTTT
CGCTTCATATCTTCATCAACCTCCACATCTACCATTCCACTTTCACTTTTTAACACAAAC
TCATCTCAAGATTTATACGAAAAATTCACACATTTAGCTTCCATTTCCTTAGCCAGAGCA
AATTATATTAAAAACTTCCAAGATTCTTCTGTTTCCACAACCCCTTTATACCCTCATAGC
TATGGAGTCTACTCTATTACACTTGGCTTTGGTACACCTCCTCAGAAAATTCCTTTCATT
ATGGACACTGGCAGTAACTTTGTTTGGTTTCCTTGTACAACAAAGTACTTATGTAAAAAC
TGTCATGTTTCTTCCTCTAGCTCACAATCAATTCCCACATTCATTCCTAAATCATCATCA
ACTGCTAGAGTTGTTGGTTGTTTGAATCCAAAATGTGGTTGGATTCATACCAAGACTAAT
CCAAAATCACGTTGCCAAGATTGCCAATCACCCACCGGAGCAAATTGTAAACAGATTTGT
CCACCATATATTATTCTCTATGGTTCAGGTTCTACAGGGGGACTTGCTCTTGTTGAAACC
CTTGACATGTATAACAAGAAAATACCTAATTTTCTTGTGGGCTGTTCTATGTTTTCTTCT
CAACAACCTGCTGGAATTGCTGGTTTAGGCCGTGGACTTGCATCATTGCCAAGTCAATTA
GGTGTTAAGAAATTCTCTTATTGTCTTGTCTCACATAGGTTTGATGACACTGGTAAAAGT
AGCAATCTTGTTTTGGATTTCAAAGCTGAAAAGTCTGCAAATTTAAGCTATACCCCACTG
CTGAAAAATCCTGTGGTGGCTGGTAAAAATGCATTATCAGTGTACTATTATGTTGGTCTA
AGAAAGATCACAGTTGGGGGGCAGAAAGTGAAGATTCCATACAAGTATTTGACACCTGAT
TCTAATGGAAATGGTGGGAGTATTGTGGATTCAGGCACAACTTTCACATACATGAATCGT
GGCGTTTTCGAGCCTGTGCTTAGTGCATTTGTGAACCAAGTTATGGGTATTTCAAGAACT
GAAAATATTGAGAAATTAACAGGTTTAAGGCCATGTTTCAATATTTCCAGCCACAAAACA
GTTTCTTTACCAGAGCTTAAGTTTCATTTCAAAGGTGGTTCAGAGATGGCATTGCCATTG
GCAAATTACTTCTCTATTGCAAGTGAAAATGATGTGATTTGTTTAACTATGATCTCAGAT
AGTGCTTTTGGCCCTGAGTTATCTACTGGACCGTCGATAATTCTGGGGAATTTTCAGATG
CAGAACTTCTTTGTTGAATTTGATCTGAGAAATGAGAAGTTTGGATTCAGGCAGCAAGTA
TGCAATTGA

Peptide Sequence

PEP ID

XP_016511411.1
PEP Infomation

PREDICTED: aspartic proteinase nepenthesin-1-like [Nicotiana tabacum]
Sequence

MASSSSSYFLLFLSLFPLLFRFISSSTSTSTIPLSLFNTNSSQDLYEKFTHLASISLARA
NYIKNFQDSSVSTTPLYPHSYGVYSITLGFGTPPQKIPFIMDTGSNFVWFPCTTKYLCKN
CHVSSSSSQSIPTFIPKSSSTARVVGCLNPKCGWIHTKTNPKSRCQDCQSPTGANCKQIC
PPYIILYGSGSTGGLALVETLDMYNKKIPNFLVGCSMFSSQQPAGIAGLGRGLASLPSQL
GVKKFSYCLVSHRFDDTGKSSNLVLDFKAEKSANLSYTPLLKNPVVAGKNALSVYYYVGL
RKITVGGQKVKIPYKYLTPDSNGNGGSIVDSGTTFTYMNRGVFEPVLSAFVNQVMGISRT
ENIEKLTGLRPCFNISSHKTVSLPELKFHFKGGSEMALPLANYFSIASENDVICLTMISD
SAFGPELSTGPSIILGNFQMQNFFVEFDLRNEKFGFRQQVCN

Transcript Sequence

Gene sequence data has not been registered.